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Copy pathgraph.go
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Copy pathgraph.go
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257 lines (221 loc) · 6.06 KB
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package main
import (
"fmt"
"strings"
services "github.com/CHESSComputing/golib/services"
"github.com/CHESSComputing/golib/utils"
)
type NodeData struct {
ID string `json:"id"`
Label string `json:"label"`
Group string `json:"group"` // drives color-coding (schema name)
Details map[string]any `json:"details"` // full record, shown on click
}
type GraphNode struct {
Data NodeData `json:"data"`
}
type EdgeData struct {
ID string `json:"id"`
Source string `json:"source"`
Target string `json:"target"`
Prov bool `json:"prov,omitempty"`
ProvDid string `json:"provDid,omitempty"`
}
type GraphEdge struct {
Data EdgeData `json:"data"`
}
type GraphElements struct {
Nodes []GraphNode `json:"nodes"`
Edges []GraphEdge `json:"edges"`
}
func toStringSlice(v any) []string {
var out []string
switch t := v.(type) {
case []any:
for _, x := range t {
if s, ok := x.(string); ok && s != "" {
out = append(out, s)
}
}
case []string:
out = t
}
return out
}
func shortLabel(r map[string]any, group string) string {
doi, _ := r["doi"].(string)
if doi != "" {
return fmt.Sprintf("doi (%s)", doi)
}
app, _ := r["application"].(string)
if app != "" {
return fmt.Sprintf("metadata (%s)", app)
}
schema, _ := r["schema"].(string)
if schema == "specscans" {
return group
}
if schema != "" {
return fmt.Sprintf("metadata (%s)", schema)
}
return group
}
const ownerDidKey = "_owner_did"
func fetchOwned(did string, records *[]map[string]any) {
mrec, err := findMetadataRecord(did)
if err != nil {
return
}
*records = append(*records, mrec)
mdid, _ := mrec["did"].(string)
if mdid == "" {
mdid = did
}
if provRecords, err := getData("provenance", mdid); err == nil {
for _, p := range provRecords {
p[ownerDidKey] = mdid
*records = append(*records, p)
}
}
spec := map[string]any{"did": mdid}
if specRecords, err := fetchSpecScans(services.ServiceRequest{
Client: "frontend",
ServiceQuery: services.ServiceQuery{Spec: spec},
}); err == nil {
for _, s := range specRecords {
if _, ok := s["schema"]; !ok {
s["schema"] = "specscans"
}
s[ownerDidKey] = mdid
*records = append(*records, s)
}
}
}
func fetchGraphRecords(did string) []map[string]any {
var records []map[string]any
fetchOwned(did, &records)
for _, r := range utils.List2Set(getParents(did)) {
fetchOwned(r, &records)
}
var parents []string
if provParents, err := getData("parents", did); err == nil {
for _, r := range provParents {
if f, ok := r["parent_did"]; ok && f != nil {
if v, ok := f.(string); ok {
parents = append(parents, v)
}
}
}
}
for _, r := range utils.List2Set(parents) {
fetchOwned(r, &records)
}
return records
}
func buildGraph(records []map[string]any) GraphElements {
var els GraphElements
nodeIDs := make([]string, len(records))
groups := make([]string, len(records))
provDidByOwner := make(map[string]string)
var provIdx, specIdx int
// Pass 1: Identify records and map provenance DIDs by owner metadata record
for i, r := range records {
did, _ := r["did"].(string)
schema, _ := r["schema"].(string)
ownerDid, hasOwner := r[ownerDidKey].(string)
isSpec := (schema == "specscans")
// Provenance records often have schema == "", so check ownerDidKey as well
isProv := (schema == "provenance" || strings.HasPrefix(schema, "provenance") || (hasOwner && ownerDid != "" && !isSpec))
if isSpec {
groups[i] = "specscans"
nodeIDs[i] = fmt.Sprintf("/specscans-%d%s", specIdx, did)
specIdx++
} else if isProv {
provID := fmt.Sprintf("/provenance-%d%s", provIdx, did)
provIdx++
targetOwner := ownerDid
if targetOwner == "" {
targetOwner = did
}
if targetOwner != "" {
provDidByOwner[targetOwner] = provID
}
} else {
groups[i] = schema
if did != "" {
nodeIDs[i] = fmt.Sprintf("/record%s", did)
}
}
}
// Pass 2: Create nodes (provenance records are skipped from becoming nodes)
seen := make(map[string]bool)
for i, r := range records {
nodeID := nodeIDs[i]
schema, _ := r["schema"].(string)
ownerDid, hasOwner := r[ownerDidKey].(string)
isSpec := (schema == "specscans")
isProv := (schema == "provenance" || strings.HasPrefix(schema, "provenance") || (hasOwner && ownerDid != "" && !isSpec))
if isProv || nodeID == "" || seen[nodeID] {
continue
}
seen[nodeID] = true
did, _ := r["did"].(string)
// Attach provenance DID to metadata details so frontend root-node logic can pick it up
if provDid, ok := provDidByOwner[did]; ok {
r["_prov_did"] = provDid
}
els.Nodes = append(els.Nodes, GraphNode{Data: NodeData{
ID: nodeID,
Label: shortLabel(r, groups[i]),
Group: groups[i],
Details: r,
}})
}
metaNodeByDid := make(map[string]string)
for i, r := range records {
if strings.HasPrefix(nodeIDs[i], "/record") {
did, _ := r["did"].(string)
if did != "" {
metaNodeByDid[did] = nodeIDs[i]
}
}
}
addEdge := func(source, target string, provDid string) {
if source == "" || target == "" || source == target || !seen[source] || !seen[target] {
return
}
edge := GraphEdge{Data: EdgeData{
ID: source + "->" + target,
Source: source,
Target: target,
}}
if provDid != "" {
edge.Data.Prov = true
edge.Data.ProvDid = provDid
}
els.Edges = append(els.Edges, edge)
}
for i, r := range records {
nodeID := nodeIDs[i]
if nodeID == "" || !strings.HasPrefix(nodeID, "/record") {
continue
}
did, _ := r["did"].(string)
targetProvDid := provDidByOwner[did]
// Metadata -> Metadata lineage (tagged with target node's provenance DID)
for _, parentDid := range toStringSlice(r["parent_dids"]) {
addEdge(metaNodeByDid[parentDid], nodeID, targetProvDid)
}
if parentDid, ok := r["parent_did"].(string); ok && parentDid != "" {
addEdge(metaNodeByDid[parentDid], nodeID, targetProvDid)
}
// Specscans -> Metadata link
if ownerDid, ok := r[ownerDidKey].(string); ok && ownerDid != "" {
schema, _ := r["schema"].(string)
if schema == "specscans" {
addEdge(nodeID, metaNodeByDid[ownerDid], "")
}
}
}
return els
}