From 26f0617f16e9165f0892ffd93ffe7047aa7380ca Mon Sep 17 00:00:00 2001
From: JuPoIm <juliette.potier@institutimagine.org>
Date: Wed, 19 Aug 2026 17:55:54 +0200
Subject: [PATCH 1/2] Create promot.md

Metadata for displaying PROMOT Ontology on OBO library, OLS and AberOWL
---
 ontology/promot.md | 74 ++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 74 insertions(+)
 create mode 100644 ontology/promot.md

diff --git a/ontology/promot.md b/ontology/promot.md
new file mode 100644
index 000000000..85005a7fb
--- /dev/null
+++ b/ontology/promot.md
@@ -0,0 +1,74 @@
+---
+layout: ontology_detail
+id: promot
+title: PROMOT Ontology
+jobs:
+  - id: https://travis-ci.org/JuPoIm/promot
+    type: travis-ci
+build:
+  checkout: git clone https://github.com/JuPoIm/promot.git
+  system: git
+  path: "."
+contact:
+  email: juliette.potier@institutimagine.org
+  label: 
+  github: https://github.com/JuPoIm/
+description: PROMOT Ontology is an ontology that describes three groups of neuromuscular diseases, their related gene variants, phenotypes, and affected anatomical entities, body structures, body functions and activities.
+domain: health
+homepage: https://github.com/JuPoIm/promot
+products:
+  - id: promot-en.owl
+    name: "PROMOT Ontology main release in OWL format (english version)"
+  - id: promot-en.obo
+    name: "PROMOT Ontology additional release in OBO format (english version)"
+  - id: promot-en.json
+    name: "PROMOT Ontology additional release in OBOJSon format (english version)"
+  - id: promot-int.owl
+    name: "PROMOT Ontology main release in OWL format (international version)"
+  - id: promot-int.obo
+    name: "PROMOT Ontology additional release in OBO format (international version)"
+  - id: promot-int.json
+    name: "PROMOT Ontology additional release in OBOJSon format (international version)"
+  - id: promot/promot-base.owl
+    name: "PROMOT Ontology main release in OWL format (english version)"
+  - id: promot/promot-base.obo
+    name: "PROMOT Ontology additional release in OBO format (english version)"
+  - id: promot/promot-base.json
+    name: "PROMOT Ontology additional release in OBOJSon format (english version)"
+dependencies:
+- id: bfo
+- id: ordo
+- id: fma
+- id: hp
+- id: icf
+- id: snomed
+- id: ro
+- id: ncit
+- id: obi
+- id: eco
+- id: iao
+- id: so
+
+tracker: https://github.com/JuPoIm/promot/issues
+license:
+  url: http://creativecommons.org/licenses/by/4.0/
+  label: CC-BY-SA
+activity_status: active
+---
+
+The PROMOT ontology represents three groups of neuromuscular diseases related to the 13 genes the PROMOT Master Observational Trial focuses on:
+
+* Oculopharyngeal Muscular Dystrophy (_PABPN1_)
+* Congenital Myasthenic Syndromes (_CHRNE_, _DOK7_, _COLQ_, _RAPSN_, _GFPT1_, _GMPPB_)
+* Congenital Myopathies (_RYR1_, _TTN_, _NEB_, _MTM1_, _ACTA1_, _SELENON_)
+
+This ontology describes the phenotypes associated to the diseases and genes. It also describes the affected anatomical entities, body structures, body functions, and activities.
+
+Intended users are the experts from the PROMOT project but also anyone interested in neuromuscular diseases and their impacts on functioning and activities, such as the newly created NMDO project consortium.
+
+The ontology relates to the following OBO ontologies: BFO, ECO, HP, IAO, NCIT, OBI, RO and SO.
+
+The PROMOT ontology was built in the context of the "Performing a Rare Disease-Oriented Master Observational Trial" initiative (PROMOT initiative). It aims to be the conceptual schema for the PROMOT initiative common data model. This common data model is intended to collect and share in a federated infrastructure patient data scattered between the different sites involved in the master observational trial.
+
+The international version of the ontology is available on [Bioportal](https://bioportal.bioontology.org/ontologies/PROMOT) under the same name.
+

From a00d1fbc357bae0dd0115a00c0f74ddd6b48496e Mon Sep 17 00:00:00 2001
From: JuPoIm <juliette.potier@institutimagine.org>
Date: Wed, 19 Aug 2026 18:00:50 +0200
Subject: [PATCH 2/2] Update promot.md

Licence modification
---
 ontology/promot.md | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/ontology/promot.md b/ontology/promot.md
index 85005a7fb..2711f3cc9 100644
--- a/ontology/promot.md
+++ b/ontology/promot.md
@@ -51,8 +51,8 @@ dependencies:
 
 tracker: https://github.com/JuPoIm/promot/issues
 license:
-  url: http://creativecommons.org/licenses/by/4.0/
-  label: CC-BY-SA
+  url: https://creativecommons.org/licenses/by-nc-sa/4.0/
+  label: CC-BY-NC-SA
 activity_status: active
 ---