From b52d5cd83525f11acea2f526451a7c97579f4aed Mon Sep 17 00:00:00 2001 From: mite-bot Date: Mon, 24 Aug 2026 16:07:05 +0200 Subject: [PATCH 1/5] Add submission UUID file --- .../ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json | 44 +++++++++++++++++++ 1 file changed, 44 insertions(+) create mode 100644 mite_data/data/ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json diff --git a/mite_data/data/ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json b/mite_data/data/ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json new file mode 100644 index 00000000..d5a7c52e --- /dev/null +++ b/mite_data/data/ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json @@ -0,0 +1,44 @@ +{ + "accession": "MITE9999999", + "status": "pending", + "changelog": [ + { + "version": "1", + "date": "2026-08-24", + "contributors": [ + "0009-0000-8651-1669" + ], + "reviewers": [ + "BBBBBBBBBBBBBBBBBBBBBBBB" + ], + "comment": "New entry." + } + ], + "enzyme": { + "name": "ArmH1", + "databaseIds": { + "uniprot": "G3FLZ7", + "genpept": "" + }, + "references": [ + "doi:" + ] + }, + "reactions": [ + { + "evidence": { + "evidenceCode": [], + "references": [ + "doi:" + ] + }, + "reactions": [ + { + "products": [ + "" + ] + } + ] + } + ] +} \ No newline at end of file From e507f3586bb9d2ccaea9210047b095121f72bc9f Mon Sep 17 00:00:00 2001 From: mite-bot Date: Mon, 24 Aug 2026 16:28:45 +0200 Subject: [PATCH 2/5] Update submission --- .../ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json | 48 ++++++++++++++----- 1 file changed, 35 insertions(+), 13 deletions(-) diff --git a/mite_data/data/ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json b/mite_data/data/ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json index d5a7c52e..a1a9b805 100644 --- a/mite_data/data/ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json +++ b/mite_data/data/ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json @@ -1,6 +1,7 @@ { "accession": "MITE9999999", "status": "pending", + "comment": "Melleolide halogenation in Armillaria mellea. Putative MiBiG entry has been retired (BGC0001401)", "changelog": [ { "version": "1", @@ -16,29 +17,50 @@ ], "enzyme": { "name": "ArmH1", + "description": "Flavin-dependent halogenase", + "references": [ + "doi:10.1128/AEM.03168-15" + ], "databaseIds": { "uniprot": "G3FLZ7", - "genpept": "" + "genpept": "AEM76785.1" }, - "references": [ - "doi:" - ] + "cofactors": { + "organic": [ + "FAD", + "NAD" + ] + } }, "reactions": [ { - "evidence": { - "evidenceCode": [], - "references": [ - "doi:" - ] - }, + "tailoring": [ + "Halogenation" + ], + "description": "Single Chlorination of melleolide F representing melleloids as whole.", + "reactionSMARTS": "[#6:1](-[#8:16])-[#6:2]1-[#6@:10]2(\\[#8:29])-[#6@:11](/[#8:17]-[#6:25](=[#8:26])-[#6:24]3:[#6:19](:[#6:20]:[#6:21](-[#8:28]):[#6:22]:[#6:23]:3-[#8:27])-[#6:18])-[#6:12]-[#6@:9]-2(\\[#6:13])-[#6:8]2-[#6:4](-[#6:5]-[#6@:6](/[#6:15])(\\[#6:14])-[#6:7]-2)-[#6:3]=1>>[#6:1](-[#8:16])-[#6:2]1-[#6@:10]2(\\[#8:29])-[#6@:11](/[#8:17]-[#6:25](=[#8:26])-[#6:24]3:[#6:19](:[#6:20](-[Cl]):[#6:21](-[#8:28]):[#6:22]:[#6:23]:3-[#8:27])-[#6:18])-[#6:12]-[#6@:9]-2(\\[#6:13])-[#6:8]2-[#6:4](-[#6:5]-[#6@:6](/[#6:15])(\\[#6:14])-[#6:7]-2)-[#6:3]=1", "reactions": [ { + "substrate": "Cc1cc(O)cc(O)c1C(=O)O[C@@H]1C[C@]2(C)C3CC(C)(C)CC3C=C(CO)[C@]12O", "products": [ - "" - ] + "Cc1c(Cl)c(O)cc(O)c1C(=O)O[C@@H]1C[C@]2(C)C3CC(C)(C)CC3C=C(CO)[C@]12O" + ], + "isIntermediate": false, + "description": "Chlorinating melleolide F to 6'-chloromelleolide F" } - ] + ], + "evidence": { + "evidenceCode": [ + "Heterologous expression", + "In vitro assay" + ], + "references": [ + "doi:10.1128/AEM.03168-15" + ] + }, + "databaseIds": { + "rhea": "67160" + } } ] } \ No newline at end of file From 69ec9fef9eae2136163e250030c6de95dd87ff58 Mon Sep 17 00:00:00 2001 From: mite-bot Date: Thu, 27 Aug 2026 22:00:14 +0200 Subject: [PATCH 3/5] Delete mite_data/data/ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json --- .../ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json | 66 ------------------- 1 file changed, 66 deletions(-) delete mode 100644 mite_data/data/ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json diff --git a/mite_data/data/ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json b/mite_data/data/ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json deleted file mode 100644 index a1a9b805..00000000 --- a/mite_data/data/ba22d4a4-9fad-11f1-a881-7d5f8d37e7b5.json +++ /dev/null @@ -1,66 +0,0 @@ -{ - "accession": "MITE9999999", - "status": "pending", - "comment": "Melleolide halogenation in Armillaria mellea. Putative MiBiG entry has been retired (BGC0001401)", - "changelog": [ - { - "version": "1", - "date": "2026-08-24", - "contributors": [ - "0009-0000-8651-1669" - ], - "reviewers": [ - "BBBBBBBBBBBBBBBBBBBBBBBB" - ], - "comment": "New entry." - } - ], - "enzyme": { - "name": "ArmH1", - "description": "Flavin-dependent halogenase", - "references": [ - "doi:10.1128/AEM.03168-15" - ], - "databaseIds": { - "uniprot": "G3FLZ7", - "genpept": "AEM76785.1" - }, - "cofactors": { - "organic": [ - "FAD", - "NAD" - ] - } - }, - "reactions": [ - { - "tailoring": [ - "Halogenation" - ], - "description": "Single Chlorination of melleolide F representing melleloids as whole.", - "reactionSMARTS": "[#6:1](-[#8:16])-[#6:2]1-[#6@:10]2(\\[#8:29])-[#6@:11](/[#8:17]-[#6:25](=[#8:26])-[#6:24]3:[#6:19](:[#6:20]:[#6:21](-[#8:28]):[#6:22]:[#6:23]:3-[#8:27])-[#6:18])-[#6:12]-[#6@:9]-2(\\[#6:13])-[#6:8]2-[#6:4](-[#6:5]-[#6@:6](/[#6:15])(\\[#6:14])-[#6:7]-2)-[#6:3]=1>>[#6:1](-[#8:16])-[#6:2]1-[#6@:10]2(\\[#8:29])-[#6@:11](/[#8:17]-[#6:25](=[#8:26])-[#6:24]3:[#6:19](:[#6:20](-[Cl]):[#6:21](-[#8:28]):[#6:22]:[#6:23]:3-[#8:27])-[#6:18])-[#6:12]-[#6@:9]-2(\\[#6:13])-[#6:8]2-[#6:4](-[#6:5]-[#6@:6](/[#6:15])(\\[#6:14])-[#6:7]-2)-[#6:3]=1", - "reactions": [ - { - "substrate": "Cc1cc(O)cc(O)c1C(=O)O[C@@H]1C[C@]2(C)C3CC(C)(C)CC3C=C(CO)[C@]12O", - "products": [ - "Cc1c(Cl)c(O)cc(O)c1C(=O)O[C@@H]1C[C@]2(C)C3CC(C)(C)CC3C=C(CO)[C@]12O" - ], - "isIntermediate": false, - "description": "Chlorinating melleolide F to 6'-chloromelleolide F" - } - ], - "evidence": { - "evidenceCode": [ - "Heterologous expression", - "In vitro assay" - ], - "references": [ - "doi:10.1128/AEM.03168-15" - ] - }, - "databaseIds": { - "rhea": "67160" - } - } - ] -} \ No newline at end of file From 6b15540f288703d856e09b2ef63d16e72b8a9eba Mon Sep 17 00:00:00 2001 From: mite-bot Date: Thu, 27 Aug 2026 22:00:16 +0200 Subject: [PATCH 4/5] Add submission --- mite_data/data/MITE9999999.json | 66 +++++++++++++++++++++++++++++++++ 1 file changed, 66 insertions(+) create mode 100644 mite_data/data/MITE9999999.json diff --git a/mite_data/data/MITE9999999.json b/mite_data/data/MITE9999999.json new file mode 100644 index 00000000..d9de5300 --- /dev/null +++ b/mite_data/data/MITE9999999.json @@ -0,0 +1,66 @@ +{ + "accession": "MITE9999999", + "status": "active", + "comment": "Melleolide halogenation in Armillaria mellea. Putative MiBiG entry has been retired (BGC0001401)", + "changelog": [ + { + "version": "1", + "date": "2026-08-24", + "contributors": [ + "0009-0000-8651-1669" + ], + "reviewers": [ + "0009-0008-6482-7206" + ], + "comment": "New entry." + } + ], + "enzyme": { + "name": "ArmH1", + "description": "Flavin-dependent halogenase", + "references": [ + "doi:10.1128/AEM.03168-15" + ], + "databaseIds": { + "uniprot": "G3FLZ7", + "genpept": "AEM76785.1" + }, + "cofactors": { + "organic": [ + "FAD", + "NAD" + ] + } + }, + "reactions": [ + { + "tailoring": [ + "Halogenation" + ], + "description": "Single Chlorination of melleolide F representing melleloids as whole.", + "reactionSMARTS": "[#6:1](-[#8:16])-[#6:2]1-[#6@:10]2(\\[#8:29])-[#6@:11](/[#8:17]-[#6:25](=[#8:26])-[#6:24]3:[#6:19](:[#6:20]:[#6:21](-[#8:28]):[#6:22]:[#6:23]:3-[#8:27])-[#6:18])-[#6:12]-[#6@:9]-2(\\[#6:13])-[#6:8]2-[#6:4](-[#6:5]-[#6@:6](/[#6:15])(\\[#6:14])-[#6:7]-2)-[#6:3]=1>>[#6:1](-[#8:16])-[#6:2]1-[#6@:10]2(\\[#8:29])-[#6@:11](/[#8:17]-[#6:25](=[#8:26])-[#6:24]3:[#6:19](:[#6:20](-[Cl]):[#6:21](-[#8:28]):[#6:22]:[#6:23]:3-[#8:27])-[#6:18])-[#6:12]-[#6@:9]-2(\\[#6:13])-[#6:8]2-[#6:4](-[#6:5]-[#6@:6](/[#6:15])(\\[#6:14])-[#6:7]-2)-[#6:3]=1", + "reactions": [ + { + "substrate": "Cc1cc(O)cc(O)c1C(=O)O[C@@H]1C[C@]2(C)C3CC(C)(C)CC3C=C(CO)[C@]12O", + "products": [ + "Cc1c(Cl)c(O)cc(O)c1C(=O)O[C@@H]1C[C@]2(C)C3CC(C)(C)CC3C=C(CO)[C@]12O" + ], + "isIntermediate": false, + "description": "Chlorinating melleolide F to 6'-chloromelleolide F" + } + ], + "evidence": { + "evidenceCode": [ + "Heterologous expression", + "In vitro assay" + ], + "references": [ + "doi:10.1128/AEM.03168-15" + ] + }, + "databaseIds": { + "rhea": "67160" + } + } + ] +} \ No newline at end of file From 5992bb0969122e912a18e4b14e24a011e01fb6e0 Mon Sep 17 00:00:00 2001 From: "Mitja M. Zdouc" <95709447+mmzdouc@users.noreply.github.com> Date: Wed, 9 Sep 2026 12:38:58 +0200 Subject: [PATCH 5/5] Update MITE9999999.json Reviewed review --- mite_data/data/MITE9999999.json | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/mite_data/data/MITE9999999.json b/mite_data/data/MITE9999999.json index d9de5300..55f01e89 100644 --- a/mite_data/data/MITE9999999.json +++ b/mite_data/data/MITE9999999.json @@ -10,7 +10,8 @@ "0009-0000-8651-1669" ], "reviewers": [ - "0009-0008-6482-7206" + "0009-0008-6482-7206", + "0000-0001-6534-6609" ], "comment": "New entry." } @@ -63,4 +64,4 @@ } } ] -} \ No newline at end of file +}