Hi,
I'm working with the barley genome which has chromosomes exceeding the 2^29 length limit for creating a bai index.
I therefore need to make a csi index.
But Rsamtools seems not to be able to handle bam files that exceed this limit and it seems it cannot handle csi index.
Hi,
I'm working with the barley genome which has chromosomes exceeding the 2^29 length limit for creating a bai index.
I therefore need to make a csi index.
But Rsamtools seems not to be able to handle bam files that exceed this limit and it seems it cannot handle csi index.