Skip to content

Keep bibliography out of the shared-vocabulary edge weight #105

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
realmarcin merged 1 commit into from
Sep 22, 2026
Merged

Keep bibliography out of the shared-vocabulary edge weight #105

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
10 changes: 8 additions & 2 deletions scripts/fleet/build_subsets.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -155,7 +155,13 @@ def scan(m, keep=None, cap_cell=300):
summary={"edges":{},"cells":{}}
for a,b in itertools.combinations(ORDER,2):
shared=set(idx[a]["terms"])&set(idx[b]["terms"])
shared={t for t in shared if t.split(":")[0]!="DOI" or True}
# An edge counts shared *concepts*, not shared bibliography. roots.CITATION
# says why: every Mech cites papers, so counting those "would say only
# that". build_data.py already keeps them out of the heatmap ordering and
# the cell indexes below already skip them; the edge weight was the one
# place that still counted them, because this line read
# `!="DOI" or True` and the `or True` made it a no-op (#62).
shared={t for t in shared if t.split(":")[0] not in CITATION}
if not shared: continue
rows=[]
for t in shared:
Expand All @@ -165,7 +171,7 @@ def scan(m, keep=None, cap_cell=300):
byp=collections.Counter(t.split(":")[0] for t in shared)
doc={"a":a,"b":b,"base":{a:MECHS[a]["base"],b:MECHS[b]["base"]},"n":len(shared),"by":dict(byp.most_common()),"terms":rows}
fn=f"{a}--{b}.json"; json.dump(doc,open(f"{OUT}/edges/{fn}","w"),separators=(",",":"),ensure_ascii=False)
summary["edges"][f"{a}|{b}"]={"n":len(shared),"by":dict(byp.most_common()),"ex":[{"id":r["id"],"label":r["l"]} for r in rows if r["l"] and r["id"].split(":")[0]!="DOI"][:3]}
summary["edges"][f"{a}|{b}"]={"n":len(shared),"by":dict(byp.most_common()),"ex":[{"id":r["id"],"label":r["l"]} for r in rows if r["l"] and r["id"].split(":")[0] not in CITATION][:3]}
print("edge",a,b,len(shared),os.path.getsize(f"{OUT}/edges/{fn}")//1024,"KB")
for m in ORDER:
for p,(n,refs) in idx[m]["cells"].items():
Expand Down
Loading