Investigate building a Nextflow plugin that will replace the data collection Groovy function currently in use.
Data may be sent to the plugin via a to_summary(channel, type) e.g. to_summary(ch_input_genome, input_genome), to_summary(ch_longreads, input_longreads)
This would generate the current TV enhanced file containing: pipeline information, run information, execution logs.
At a later date we will revisit to include calling the API layer of the DB and pulling the most upto date optimised values for the in-progress run.
Investigate building a Nextflow plugin that will replace the data collection Groovy function currently in use.
Data may be sent to the plugin via a
to_summary(channel, type)e.g.to_summary(ch_input_genome, input_genome),to_summary(ch_longreads, input_longreads)This would generate the current TV enhanced file containing: pipeline information, run information, execution logs.
At a later date we will revisit to include calling the API layer of the DB and pulling the most upto date optimised values for the in-progress run.