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@DNA-and-Natural-Algorithms-Group

DNA and Natural Algorithms Group

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  1. multistrand multistrand Public

    Multistrand nucleic acid kinetic simulator

    C++ 23 12

  2. piperine piperine Public

    Piperine compiles abstract CRNs into DNA sequences and estimates how much the generated DNA implementations may participate in undesired DNA-DNA interactions during experiments.

    Python 22 6

  3. KinDA KinDA Public

    Kinetic DNA strand displacement analyzer

    Python 18 6

  4. peppercornenumerator peppercornenumerator Public

    domain-level nucleic acid reaction enumeration

    Python 10 6

  5. nuskell nuskell Public

    Nucleic acid strand displacement compiler

    Python 10 4

  6. ArrheniusInference ArrheniusInference Public

    A framework with a reduced state space to train the Arrhenius DNA kinetic model

    Python 6 5

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