Issues

• Question about "main.nf" and "variant_remapping_tools/reads_to_remapped_variants.py"

  EBIvariation/variant-remapping#39 · Filter by author wy0411 opened on Oct 15, 2022

• Implement local realignment of old REF / new REF / ALT sequences

  EBIvariation/variant-remapping#24 · Filter by author tskir opened on Mar 26, 2021
  1

• Document / automate calculation of precision and recall metrics

  EBIvariation/variant-remapping#22 · Filter by author tskir opened on Mar 24, 2021
  1

• Migrate the Google Doc remapping algorithm into the docs for this repository

  EBIvariation/variant-remapping#19 · Filter by author tskir opened on Mar 18, 2021

• Evaluate approaches to handle deletions in the new reference

  EBIvariation/variant-remapping#18 · Filter by author tskir opened on Mar 18, 2021

• (Possibly) refactor index construction

  EBIvariation/variant-remapping#11 · Filter by author tskir opened on Jun 18, 2020