IntGenomicsLab

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1. lrsomatic lrsomatic Public

   Workflow for somatic variant calling of long read data

   Nextflow 31 5

2. scdnalong scdnalong Public

   Pipeline for processing of single-cell long read DNA data. For example data obtained through 10X-style barcoding of DNA and then sequenced on ONT/PacBio machines.

   Nextflow 3

3. SPLONGGET_analysis SPLONGGET_analysis Public

   The repository with the code used is SPLONGGET paper

   Jupyter Notebook 3 1

4. test-datasets test-datasets Public

   Test datasets used for pipelines

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5. lrsinglecell lrsinglecell Public

   LRSinglecell: single-cell long-read cDNA and DNA pipeline (Oxford Nanopore), derived from nf-core/scnanoseq

   Nextflow