Issues

• MIMIC-Extract Access denied

  MLforHealth/MIMIC_Extract#85 · Filter by author hsfbxzj opened on Jan 4, 2026
  2

• Accessing MIMIC-Extract After GCP Bucket Deprecation

  MLforHealth/MIMIC_Extract#84 · Filter by author Wenxin-Elmon-Chen opened on Sep 9, 2025
  2

• Lack the "storage.objects.list" permission to access the preprocessed data in the Google Bucket.

  MLforHealth/MIMIC_Extract#83 · Filter by author wwww-deeeee opened on Sep 1, 2025
  1

• missing mimic_extract_env_py36.yml

  MLforHealth/MIMIC_Extract#81 · Filter by author knutj opened on Oct 3, 2024

• 关于ECGNN代码相关

  MLforHealth/MIMIC_Extract#80 · Filter by author chipsOIO opened on Oct 2, 2024
  1

• README update

  MLforHealth/MIMIC_Extract#77 · Filter by author majedov opened on Jul 15, 2024

• Is the preprocessed data in google bucket still available?

  MLforHealth/MIMIC_Extract#76 · Filter by author zhaohan-xi opened on May 26, 2024
  1

• to speed up "Saving notes" step

  MLforHealth/MIMIC_Extract#74 · Filter by author yezhengli-Mr9 opened on Sep 1, 2023

• Empty icuid issue when execute mimic_direct_extract.py

  MLforHealth/MIMIC_Extract#73 · Filter by author a11525 opened on Jun 26, 2023

• Likely bug in fix_deid_tokens regexp

  MLforHealth/MIMIC_Extract#71 · Filter by author SphtKr opened on Mar 8, 2023

• Invasive and non-invasive ventilation?

  MLforHealth/MIMIC_Extract#70 · Filter by author GilesLuo opened on Sep 16, 2022

• relation "mimiciii.ccs_dx" does not exist

  MLforHealth/MIMIC_Extract#65 · Filter by author Tokyosunrise opened on Mar 24, 2022
  3

• GCP access issue

  MLforHealth/MIMIC_Extract#64 · Filter by author ajain720 opened on Mar 18, 2022
  4

• vitals_hourly_data includes lots of duplicates

  MLforHealth/MIMIC_Extract#63 · Filter by author juliangilbey opened on Dec 6, 2021

• How to get .pkl file?

  MLforHealth/MIMIC_Extract#60 · Filter by author TianJl1999 opened on Nov 4, 2021

• relation "colloid_bolus" does not exist

  MLforHealth/MIMIC_Extract#59 · Filter by author saeedehghanadbashi opened on Nov 3, 2021
  1

• code redundancy in GRUD forward method

  MLforHealth/MIMIC_Extract#58 · Filter by author 2533245542 opened on Oct 13, 2021
  1

• PackagesNotFoundError: The following packages are not available from current channels:

  MLforHealth/MIMIC_Extract#55 · Filter by author zhangyongheng78 opened on Aug 18, 2021

• The shape of extrated data is diff to the notebook

  MLforHealth/MIMIC_Extract#52 · Filter by author zhaoxiongjun opened on Apr 28, 2021
  2

• feature size of all_hour_data.h5 generate using --no_group_by_level2 True

  MLforHealth/MIMIC_Extract#50 · Filter by author pvsnp9 opened on Apr 17, 2021

• Bug in mimic_direct_extract.py: 'Series' object has no attribute 'columns' on line 973

  MLforHealth/MIMIC_Extract#47 · Filter by author amakelov opened on Jan 14, 2021

• How to extract the data for all admissions instead of the first ICU admission?

  MLforHealth/MIMIC_Extract#44 · Filter by author stdoo opened on Jan 10, 2021

• max_hours addition to the statics dataframe should not happen as an undocumented byproduct of save_numerics

  bug
  MLforHealth/MIMIC_Extract#43 · Filter by author mmcdermott opened on Dec 7, 2020

• We should likely extract valuenum instead of value

  enhancement
  MLforHealth/MIMIC_Extract#39 · Filter by author mmcdermott opened on Nov 9, 2020

• ENH allow config option to set bucket size (current default hourly, hard coded)

  enhancement
  MLforHealth/MIMIC_Extract#20 · Filter by author michaelchughes opened on Mar 3, 2020