PDB-REDO

Pinned Loading

1. dssp dssp Public

   Application to assign secondary structure to proteins

   C++ 275 33

2. alphafill alphafill Public

   AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By adding the molecular context to the protein structures, the mod…

   C++ 125 22

3. libcifpp libcifpp Public

   Library containing code to manipulate mmCIF and PDB files

   C++ 43 18

4. density-fitness density-fitness Public

   Application to calculate the density statistics (RSR, SRSR, RSCCS, EDIAm and OPIA) for x-ray structures

   C++ 10 2

5. AlphaBridge AlphaBridge Public

   Python 61 10

6. cif-tools cif-tools Public

   A suite of programs to manipulate and examine mmCIF files

   C++ 7 1