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WIP: Coupling to containerised LPJmL - #19

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sieben-gea wants to merge 13 commits into
mainfrom
s_container
Draft

WIP: Coupling to containerised LPJmL#19
sieben-gea wants to merge 13 commits into
mainfrom
s_container

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@sieben-gea

@sieben-gea sieben-gea commented Jun 18, 2026

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This pull request combines changes needed to couple to LPJmL when run from a container by setting the necessary environment variables and using lpjml executables from the PATH instead of a specific directory.

Breaking changes

TODO

@codecov

codecov Bot commented Jun 18, 2026

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Codecov Report

❌ Patch coverage is 53.87931% with 107 lines in your changes missing coverage. Please review.
✅ Project coverage is 75.77%. Comparing base (1334b1b) to head (b700669).

Files with missing lines Patch % Lines
pycoupler/config.py 51.36% 71 Missing ⚠️
pycoupler/run.py 39.21% 31 Missing ⚠️
pycoupler/coupler.py 85.71% 3 Missing ⚠️
pycoupler/utils.py 85.71% 2 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main      #19      +/-   ##
==========================================
- Coverage   78.80%   75.77%   -3.03%     
==========================================
  Files           7        7              
  Lines        1684     1783      +99     
==========================================
+ Hits         1327     1351      +24     
- Misses        357      432      +75     

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@sieben-gea
sieben-gea force-pushed the s_container branch 3 times, most recently from bb6e3aa to cbf2057 Compare September 1, 2026 11:49
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