GitHub - Schre/Read-Mapping: Mapping reads to a corresponding genome using a suffix tree (linear time construction) and Smith-Waterman local alignment algorithm · GitHub

Name		Name	Last commit message	Last commit date
Alignment.h		Alignment.h
DNA.alpha		DNA.alpha
GenomeTools.h		GenomeTools.h
ReadMappingEngine.h		ReadMappingEngine.h
SuffixTree.h		SuffixTree.h
Utilities.h		Utilities.h
a.out		a.out
alpha.alpha		alpha.alpha
main.cpp		main.cpp
test.cpp		test.cpp

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Mapping reads to a corresponding genome using a suffix tree (linear time construction) and Smith-Waterman local alignment algorithm

alignment computational-biology read-mapping smith-waterman ukkonen-algorithm

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