Issues

• Unable to install forgi from bioconda

  ViennaRNA/forgi#58 · Filter by author SuhasSrinivasan opened on Feb 3, 2026

• Build Failure: v2.2.3 tag fails to build from source

  ViennaRNA/forgi#57 · Filter by author nicoaira opened on Oct 20, 2025

• Basepair links not showing with forgi.visual.mplotlib.plot_rna

  ViennaRNA/forgi#56 · Filter by author mtod92 opened on May 2, 2025

• fgb.BulgeGraph missing 2 required positional arguments: 'graph_construction' and 'seq_obj'

  ViennaRNA/forgi#54 · Filter by author BioITWorker opened on Nov 2, 2023

• fvm.plot_rna(): nan values in annot_pos cause plotting errors

  ViennaRNA/forgi#53 · Filter by author eugenechow opened on Oct 17, 2023

• Junctions generate not only regular multiloops but also other structures

  ViennaRNA/forgi#51 · Filter by author Rimasss opened on Apr 24, 2023

• Cannot visualize RNA co-folded structures

  ViennaRNA/forgi#44 · Filter by author itamarwe opened on Sep 19, 2022

• Problem encountered: to_neato_string()

  ViennaRNA/forgi#42 · Filter by author stevewu2001 opened on Aug 4, 2022

• Secondary structure with MC-annotate

  ViennaRNA/forgi#41 · Filter by author mandar5335 opened on Feb 22, 2022

• RuntimeWarning: invalid value encountered in true_divide

  ViennaRNA/forgi#39 · Filter by author afandiadib opened on Sep 22, 2020
  1

• I can't visualize RNA with color

  ViennaRNA/forgi#37 · Filter by author Shunsuke-1994 opened on Jan 20, 2020

• ModuleNotFoundError: No module named 'RNA'

  ViennaRNA/forgi#36 · Filter by author MvanderGragt opened on Jan 13, 2020
  8

• Pickle Error

  ViennaRNA/forgi#35 · Filter by author bzudi opened on Apr 9, 2019

• PDB REMARK 350 (multiple symmetric chains)

  ViennaRNA/forgi#30 · Filter by author Bernhard10 opened on Jun 19, 2018 · 3.0

• Find a more consistent terminology

  enhancement
  ViennaRNA/forgi#11 · Filter by author Bernhard10 opened on Sep 2, 2016 · 3.0
  3