Skip to content

Understanding hicDifferentialTAD output & directionality #958

Description

@imacarth

I am using hicDifferentialTAD and trying to understand all of the outputs. I cannot find explanation of what the W-values are or how they are calculated. I was also wondering whether there is any way of distinguishing the directionality of change between the samples via something like a fold-change output. I have attached an example of the output I am seeing for reference. Thank you for such a great tool! [

HiCExdiffTADs_TKOvsWT_25kb_05_rejected.diff_tad.csv

](url)

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

      Milestone

      No milestone

      Relationships

      None yet

      Development

      No branches or pull requests

      Issue actions