Issues

• Wheels for py3.14 not available

  jackh726/bigtools#104 · Filter by author casblaauw opened on Aug 13, 2026
  1

• bigwigaverageoverbed help does not define output columns

  jackh726/bigtools#96 · Filter by author rabyj opened on Mar 17, 2026

• Files with a header but no data.

  jackh726/bigtools#95 · Filter by author nvictus opened on Feb 24, 2026

• Write better errors for BadData

  jackh726/bigtools#90 · Filter by author jackh726 opened on Oct 8, 2025

• Consider distributing release artifacts built against an older GLIBC (2.28)

  jackh726/bigtools#87 · Filter by author jackh726 opened on Jul 8, 2025
  2

• Add a note in README about libgcc

  jackh726/bigtools#86 · Filter by author jackh726 opened on Jul 8, 2025

• visualizing methylation levels at individual CpG sites

  jackh726/bigtools#85 · Filter by author petermchale opened on May 19, 2025
  37

• Problem displaying generated bigwig track in WashU genome browser

  jackh726/bigtools#83 · Filter by author ypauling opened on Apr 30, 2025
  9

• Bigtools hangs on inputs when they are not passed from stdin for certain inputs

  jackh726/bigtools#82 · Filter by author mrvollger opened on Apr 1, 2025
  4

• Allow bin_size as paramter in values

  jackh726/bigtools#77 · Filter by author ghuls opened on Jan 22, 2025
  3

• pybigtools: more flexibility with open

  jackh726/bigtools#66 · Filter by author jackh726 opened on Nov 28, 2024
  3

• Select position range in BigWig

  jackh726/bigtools#61 · Filter by author multimeric opened on Nov 13, 2024
  3

• bigtools bedgraphtobigwig -- add option to skip invalid chromosomes

  jackh726/bigtools#56 · Filter by author nleroy917 opened on Oct 29, 2024
  6

• Allow renaming chromosome names in bigWig/bigBed files.

  jackh726/bigtools#52 · Filter by author ghuls opened on Oct 14, 2024
  1

• installing pybigtools fails due to inability to compile ring v0.17.8

  jackh726/bigtools#51 · Filter by author dmalzl opened on Oct 10, 2024
  5

• Missing decoration items with UCSC genome browser

  jackh726/bigtools#48 · Filter by author mrvollger opened on Jul 19, 2024
  39

• Support specifying bed(Graph) input files as .gz

  jackh726/bigtools#39 · Filter by author jackh726 opened on May 24, 2024
  4

• Enhancements to Python writer API

  jackh726/bigtools#34 · Filter by author nvictus opened on Mar 18, 2024