C++

Workflow runs for C++

• chains groups for new mapq per alignment

  completed successfully:
  C++#380:Commited27341pushedbyNicolasBuchin
  supplementary

  Jun 25, 20261m 11s
  More actions for workflow run 380

• chains groups for new mapq per alignment

  completed successfully:
  C++#379:Commite01fcfbpushedbyNicolasBuchin
  supplementary

  Jun 25, 202638s
  More actions for workflow run 379

• SA tag for supplementary alignments

  completed successfully:
  C++#378:Commit74a5b7epushedbyNicolasBuchin
  supplementary

  Jun 23, 202646s
  More actions for workflow run 378

• Supplementary alignments for extension mode

  completed successfully:
  C++#377:Commitce401b9pushedbyNicolasBuchin
  supplementary

  Jun 17, 202658s
  More actions for workflow run 377

• Turn off adna filter

  completed successfully:
  C++#376:Commit5766e07pushedbyItolstoganov
  partial-rymers-old

  Jun 10, 202650s
  More actions for workflow run 376

• Only reporting the 90% best scoring supplementary chains in maponly mode

  completed successfully:
  C++#375:Commit798e799pushedbyNicolasBuchin
  supplementary

  Jun 10, 202640s
  More actions for workflow run 375

• Optimise add_repetitive_via_sweep: reduce allocations and redundant w…

  completed successfully:
  C++#374:Commit32ff7ebpushedbyksahlin
  repetitive-seed-sweep

  Jun 5, 202639s
  More actions for workflow run 374

• Supplementary chains reported in single-end mapping only mode

  completed successfully:
  C++#373:Commit8f81fc2pushedbyNicolasBuchin
  supplementary

  Jun 5, 202648s
  More actions for workflow run 373

• adding WIS solution to avoid rescuing all filtered seeds. take only t…

  completed successfully:
  C++#372:Commitbe3ecffpushedbyksahlin
  repetitive-seed-sweep

  Jun 5, 202646s
  More actions for workflow run 372

• Avoid unnecessary global rescue

  skipped:
  C++#371:Pull request#594openedbymarcelm
  no-global

  Jun 5, 20262s
  More actions for workflow run 371

• Avoid unnecessary global rescue

  completed successfully:
  C++#370:Commitf91ee2fpushedbymarcelm
  no-global

  Jun 5, 202651s
  More actions for workflow run 370

• Avoid unnecessary global rescue

  completed successfully:
  C++#369:Commitc97c003pushedbymarcelm
  no-global

  Jun 5, 202642s
  More actions for workflow run 369

• Merge pull request #592 from ksahlin/no-unmapped-secondary

  completed successfully:
  C++#368:Commit08c8031pushedbymarcelm
  main

  Jun 5, 202648s
  More actions for workflow run 368

• Fix unmapped secondary alignments

  skipped:
  C++#367:Pull request#592synchronizebymarcelm
  no-unmapped-secondary

  Jun 5, 20261s
  More actions for workflow run 367

• Fix: Do not output unmapped secondary alignments

  completed successfully:
  C++#366:Commitfdd5d61pushedbymarcelm
  no-unmapped-secondary

  Jun 5, 202648s
  More actions for workflow run 366

• remove local rescue. Improves speed further with no accuracy cost

  completed successfully:
  C++#365:Commitdba4de7pushedbyksahlin
  repetitive-seed-sweep

  Jun 5, 202647s
  More actions for workflow run 365

• Fix unmapped secondary alignments

  skipped:
  C++#364:Pull request#592synchronizebymarcelm
  no-unmapped-secondary

  Jun 5, 20261s
  More actions for workflow run 364

• Fix: Do not output unmapped secondary alignments

  completed successfully:
  C++#363:Commita574fb0pushedbymarcelm
  no-unmapped-secondary

  Jun 5, 202641s
  More actions for workflow run 363

• Fix unmapped secondary alignments

  skipped:
  C++#362:Pull request#592openedbymarcelm
  no-unmapped-secondary

  Jun 5, 20261s
  More actions for workflow run 362

• Fix: Do not output unmapped secondary alignments

  completed successfully:
  C++#361:Commit9c0b698pushedbymarcelm
  no-unmapped-secondary

  Jun 5, 202647s
  More actions for workflow run 361

• Fix: Do not output unmapped secondary alignments

  completed successfully:
  C++#360:Commitdd5aa9cpushedbymarcelm
  no-unmapped-secondary

  Jun 5, 202641s
  More actions for workflow run 360

• Produce secondary alignments during baseline comparison

  completed successfully:
  C++#359:Commit4d7e4c5pushedbymarcelm
  no-unmapped-secondary

  Jun 5, 202656s
  More actions for workflow run 359

• Fix: Do not output unmapped secondary alignments

  completed successfully:
  C++#358:Commit6f6d19cpushedbymarcelm
  no-unmapped-secondary

  Jun 5, 20261m 0s
  More actions for workflow run 358

• Produce secondary alignments during baseline comparison

  completed successfully:
  C++#357:Commitcc8b6abpushedbymarcelm
  no-unmapped-secondary

  Jun 5, 202645s
  More actions for workflow run 357

• Skip secondary alignments in samdiff

  completed successfully:
  C++#356:Commit3f3f50epushedbymarcelm
  no-unmapped-secondary

  Jun 5, 202641s
  More actions for workflow run 356