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1. brain-jepa-extensions brain-jepa-extensions Public

   Multi-scale temporal masking and VICReg covariance regularization for self-supervised fMRI representation learning — extensions to Brain-JEPA.

   Python

2. ens-ct-segmentation ens-ct-segmentation Public

   Multi-organ anatomic CT scan segmentation under partial supervision — ENS/Raidium 2025 Challenge

   Python

3. icm-dbs-tractography icm-dbs-tractography Public

   MRtrix3 tractography + Lead-DBS reconstruction on an open DBS dataset (ScienceDB 26302)

   Python

4. leukoaraiosis-detection leukoaraiosis-detection Public

   Weakly-supervised Swin UNETR pipeline for white matter lesion detection across 11,868 adolescents (ABCD Study) — no voxel annotations, extreme class imbalance, 21-site heterogeneity.

   Python

5. presidiostudy presidiostudy Public

   Connectivity fingerprints for DBS outcome prediction.

   Python