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v4.0.0 - #12
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davidmeijer wants to merge 43 commits into
Open
v4.0.0#12davidmeijer wants to merge 43 commits into
davidmeijer wants to merge 43 commits into
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…ssembly monomers divided by all submitted heavy atoms (#37)
* UPD: test for recovery exact assembly graphs * FIX: all assembly graphs for an entry should be retrieved for test to pass * ADD: increase coverage NRPs * TST: tests for new ruleset * UPD: improve coverage NRPs * UPD: improve coverage polyketides * UPD: prevent bidirectional polyketide cleavage; improve polyketide coverage * UPD: improve coverage polyketides
* WIP: adding sequence roles for linear readout * ENH: write out primary sequences with single compound parsing * UPD: distinguish between identical moieties being starter or tailoring * UPD: orient backbones N-terminus to C-terminus * FIX: backbone separation when multiple backbones are present * UPD: improve linear readout direction; add integration tests * FIX: simpler readout strategy with one deterministic readout for a single assembly graph
* FIX: replace SSE with polling * STY: rename hook to view in test helper
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