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Foldseek enables fast and sensitive comparisons of large structure sets.
C 1.3k 157
Compressing protein structures effectively with torsion angles
C++ 194 25
Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
C++ 183 17
Multiple Protein Structure Alignment at Scale with FoldMason
C 281 30
Fast indexing and search of discontinuous motifs in protein structures
Rust 215 26
RNA search
C 50 4
Analysis script for foldseek interface
An Interactive, Terminal-Native Protein Structure Viewer
Big Fantastic Virus Database (BFVD): Code used for analyses
Regression test for foldseek
Analysis scripts in Riboseek paper