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suvrathaprasad/README.md

Hi, I'm Suvratha 👋

I'm a computational biologist / bioinformatician based in Jena, Germany. I recently completed my PhD at Friedrich Schiller Universität Jena (Population Ecology Group), studying neo-sex chromosome evolution and dosage compensation in Vandiemenella viatica grasshoppers using multi-omics approaches. I'm now a postdoc at the Friedrich-Loeffler-Institut, working on bioinformatics for microbial pathogenicity.

  • 🔬 Research interests: sex chromosome evolution, dosage compensation, comparative genomics, transcriptomics, molecular evolution
  • 🧰 Core tools: Python, R, Snakemake, HPC/Slurm, GATK, Scanpy/Seurat, genome assembly (PacBio HiFi, Hi-C)
  • 🌐 Portfolio: suvrathaprasad.github.io
  • 📄 Publications: Google Scholar · ORCID
  • 📫 Reach me: email · LinkedIn

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  1. dN-dS-Snakemake-pipeline dN-dS-Snakemake-pipeline Public

    Snakemake pipeline for pairwise dN/dS estimation between two species

    Python

  2. VvRNA-analyses VvRNA-analyses Public

    Scripts used for analyses in the paper Evolutionary dynamics of dosage compensation and sex-biased gene expression in Morabine grasshopper Vandiemenella viatica

    R