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cerna

Here are 10 public repositories matching this topic...

zhangjunpeng411 / LncmiRSRN

LncmiRSRN: Identifying lncRNA related miRNA sponge regulatory network

sponge mirna lncrna cerna

Updated Feb 15, 2022
R

zhangjunpeng411 / miRspongeR

Identification and analysis of miRNA sponge regulation

sponge mirna cerna

Updated Sep 5, 2026
R

selcenari / ceRNAnetsim

Simulation of interactions miRNA:Competing Targets

r tidyverse tcga network-simulator mirna cerna network-biology tidygraph

Updated Oct 8, 2025
R

zhangjunpeng411 / miRSM

miRSM: Inferring miRNA sponge modules by integrating expression data and miRNA-target binding information

modules mirna cerna mirna-sponge mirna-targets

Updated Sep 5, 2026
HTML

BarryDigby / pycircdb

pycircdb: integrated circRNA database annotation for computational workflows

circrna cerna apache-hamilton

Updated Sep 3, 2026
Python

zhangjunpeng411 / SCOM

Inferring ncRNA synergistic competition

cancer gene-regulation mirna ncrna cerna

Updated Aug 20, 2024
R

zhangjunpeng411 / SpongeModule

In silico methods for predicting miRNA sponge modules

mrna mirna lncrna pancancer cerna mirna-sponge pseudogene mirna-sponge-modules cerna-modules

Updated Mar 19, 2021
MATLAB

hani-sabaie / SCZ-ceRNA-Analysis

R scripts for transcriptomic and ceRNA network analyses in schizophrenia.

microarray transcriptomics limma mirna lncrna schizophrenia cerna

Updated Dec 19, 2025
R

AqsaH999 / diabetes-cerna-rnaseq

Reproducible RNA-seq pipeline reconstructing a lncRNA–miRNA–mRNA (ceRNA) network in type 2 diabetic human pancreatic islets (GSE164416); validated at r = 0.975 against published data.

bioinformatics rna-seq reproducible-research deseq2 differential-expression mirna lncrna cerna type2-diabetes pancreatic-islet

Updated Jul 23, 2026
R

Mahsa-Ehsanifard / ceRNA-network

multiMiR package in R, providing gene-miRNA-lncRNA interactions for ceRNA network construction

rstudio cerna mirna-mrna-interaction mirna-targets mirna-database mirna-seq lncrna-rna gene-mirna-lncrna

Updated Aug 22, 2024
R

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