emm Automatic Isolate Labeller
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Updated
Mar 25, 2025 - Jupyter Notebook
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emm-typing
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Pathogen whole genome sequence (WGS) data analysis pipeline
nanopore pathogen taxonomy assembly ngs amr mlst illumina plasmid serotyping virulome emm-typing capsular-typing
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Updated
Jan 30, 2026 - Nextflow
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