gaussian-network-model

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recklesswater / tc-coupling-profile

A structure-derived indicator (block total correlation of the GNM) for where assuming independent residue motion costs the most. Pure numpy, no simulation.

python bioinformatics structural-biology protein-structure scientific-computing protein-dynamics gaussian-network-model

Updated Sep 20, 2026
Python

enesemretas / hingeprot_fortran

Star

Colab/Jupyter UI wrapper for the HingeProt pipeline to predict protein hinges and rigid parts using elastic network models (GNM/ANM), with chain selection, CA-only support, and 3D visualization.

bioinformatics protein-structure computational-biology protein-dynamics structural-bioinformatics molecular-modeling anm gnm rigid-body elastic-network-model hingeprot gaussian-network-model anisotropic-network-model hinge-detection protein-motion

Updated Jan 27, 2026
Jupyter Notebook

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