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method-language-model

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Scindices / annacarbery--binding-sites

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IF-SitePred is a method for predicting ligand-binding sites on protein structures. It first generates an embedding for each residue of the protein using the ESM-IF1 (inverse folding) model, then performs point cloud clustering to identify binding site centers.

lang-python status-archived interface-cli method-deep-learning role-application domain-structural-biology entity-protein entity-small-molecule status-published scope-focused domain-drug-discovery task-binding-site method-language-model
  • Updated Mar 25, 2024
  • Python

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