proteomics-datasets

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SDRF: The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets

Dataloader for common proteomics search engine outputs into AnnData format

python proteomics proteomics-datasets anndata

PACOM (Proteomics Assay COMparator) is a Java stand alone tool for visualize and compare large proteomics datasets

List of online databases and resources for Mycobacterium Tuberculosis

Analysis from Leduc and Slavov (2025): Protein degradation and growth dependent dilution substantially shape mammalian proteomes

Indexing of FASTA files for searching peptide masses and sequences

database indexing fasta proteomics proteomics-data proteomics-datasets

Python pipeline for Absolute Protein Quantification data analysis

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