rdml

Deterministic qPCR QC pipeline for RDML and curve CSV inputs, with explicit amplification-state calling, contamination and replicate-discordance review, and Snakemake batch orchestration for auditable lab handoff outputs.

python laboratory workflow bioinformatics quality-control snakemake data-pipeline qpcr rdml deterministic-analysis

Updated Mar 21, 2026
Python

kablag / AScall

Star

r shiny pcr rdml

Updated Mar 14, 2020
R

wangxuan0813 / qpcr-lc96-figures

Star

Codex skill for Roche LightCycler/LC96 qPCR parsing, QC, Delta Ct analysis, and publication-ready WT/KO figures.

data-visualization matplotlib qpcr rdml codex-skill lightcycler lc96

Updated Jun 15, 2026
Python

tomaxiwu-bit / bioeng-qpcr

Star

qPCR analysis toolkit: RDML 1.3 & vendor-export parsing, amplification-curve fitting, efficiency estimation, reference-gene stability (geNorm/NormFinder/BestKeeper/delta-Ct), MIQE 2.0 reporting, local desktop GUI & web workbench.

bioinformatics scientific-computing qpcr rdml miqe reference-gene real-time-pcr amplification-curve

Updated Sep 6, 2026
Python

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