a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference
The GENIE Generator is a leading simulation tool for neutrino experiments, featuring a modular framework with advanced physics, BSM channels, and tuned models from global data analysis. It supports all neutrinos, targets, and energies (MeV–PeV), with tools for flux, geometry, event generation, and reweighting.
Efficient detection of planets transiting quiet or active stars
Simulation of instrumental systematic effects in the context of CMB observations
letsRept is an R package to sample reptile species information from The Reptile Database website
The International Code of Nomenclature of Prokaryotes Described from Sequence Data
Simulation and Analysis in Matlab for the KATRIN experiment
An R Shiny App that assesses sampling effects (e.g. sample size and BEAST parameters) on GMYC output for species delimitation.
Repositório criado para aulas da disciplina de Bioestatística Básica do Programa de Pós-Graduação em Ciências Biológicas da Universidade Federal da Paraíba.
Casabio's living Journal of Systematics and Ecology — git-inspired versioned knowledge objects, total provenance, and ethics-in-architecture locality protection. NestJS modular monolith + React/TS client.
SDSS sky-glow and background-systematics analysis using public spectroscopic data, source-linked provenance and reproducible diagnostics to examine sky emission, contamination and measurement limits in astronomical spectra.
A collection of Python scripts to facilitate the preprocessing of input sequences to dynamic homology.
This repository provides copyright-free presentations, handouts and certificates of the "Plant Identification course, tools for publishing new taxa & and herbarium management" which took place in February 19-23, Tunja, Colombia
Comparisons of topologies and support between phylogenetic trees
Tools, reference guides and tutorials on Systematics and E-Taxonomy
My slides for my lecture on biodiversity, evolution and taxonomy for a short course for high school biology teachers, organised by the University of Cape Town's Schools Development Unit
A small pipeline to analyse marker data into a phylogeny
Pipeline for phylogenomic analyses for the paper Paredes-Burneo et al. (2026). From data assembly to multiple phylogenetic analyses.
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