Issues

• Can the correction of the cool file be correctly recognised by fanc?

  vaquerizaslab/fanc#211 · Filter by author oganesson76 opened on Sep 27, 2025

• Failed to build installable wheels for some pyproject.toml based projects (fanc)

  vaquerizaslab/fanc#210 · Filter by author zhaoxj2023 opened on Sep 11, 2025

• fanc compare with juicer inputs does not seem to scale the matrix

  vaquerizaslab/fanc#209 · Filter by author varunkas opened on Jul 29, 2025

• tables/hdf5 error in creating temporary files during generate_pairs_split() call

  vaquerizaslab/fanc#208 · Filter by author dnygard opened on Jun 10, 2025

• Got zero division error when doing insulation score analysis

  vaquerizaslab/fanc#207 · Filter by author arisu1017 opened on May 17, 2025

• RuntimeWarning: divide by zero and error with expected and observed / expected values and genome-wide A/B compartment calling

  vaquerizaslab/fanc#206 · Filter by author vanesroy opened on May 13, 2025

• dependency with sqlite3 is missing in pypi package

  vaquerizaslab/fanc#204 · Filter by author rattei opened on Apr 25, 2025

• fancplot doesn't work

  vaquerizaslab/fanc#203 · Filter by author GlenZhang-GZ opened on Mar 15, 2025

• output filetype of fanc compare

  vaquerizaslab/fanc#202 · Filter by author rikrdo89 opened on Mar 4, 2025

• plotting of bed files using -p gene adds a random, inconsistent horizontal line

  vaquerizaslab/fanc#201 · Filter by author rikrdo89 opened on Feb 28, 2025

• ZeroDivisionError: division by zero

  vaquerizaslab/fanc#200 · Filter by author 80QvQ08 opened on Nov 26, 2024
  2

• How to calculate the loop strength of APA plot ?

  vaquerizaslab/fanc#199 · Filter by author nieyage opened on Oct 14, 2024
  1

• fanc loops error with .mcool file

  vaquerizaslab/fanc#198 · Filter by author wangmhan opened on Sep 12, 2024

• Merging pairs files from biological replicate

  vaquerizaslab/fanc#197 · Filter by author Knetsy opened on Sep 6, 2024

• illegal hardware instruction fanc –version

  vaquerizaslab/fanc#196 · Filter by author hd931 opened on Aug 13, 2024

• The command fanc compartments -r 5 encountered an error

  vaquerizaslab/fanc#195 · Filter by author LHXqwq opened on Jul 31, 2024

• How to do plotting.TriangularMatrixPlot without ice balancing

  vaquerizaslab/fanc#194 · Filter by author WenfanKK opened on Jul 22, 2024
  1

• Wrong name for parameter ylim

  vaquerizaslab/fanc#193 · Filter by author joshuak94 opened on Jul 19, 2024

• Specific package versions for matplotlib and pandas?

  vaquerizaslab/fanc#192 · Filter by author joshuak94 opened on Jun 15, 2024
  1

• Fanc insulation hangs?

  vaquerizaslab/fanc#191 · Filter by author gdolsten opened on Jun 13, 2024

• Statistical methods employed comparing insulation scores

  vaquerizaslab/fanc#190 · Filter by author luzporras opened on May 17, 2024
  1

• Load .insulation file (File type not recognised)

  vaquerizaslab/fanc#189 · Filter by author Nicolas-Py opened on May 11, 2024

• Problem with fanc auto

  vaquerizaslab/fanc#188 · Filter by author CStehn opened on May 6, 2024

• Is it possible A/B compartment analysis entire genome

  vaquerizaslab/fanc#187 · Filter by author 13061994 opened on May 3, 2024

• cooler version difference in parameters

  vaquerizaslab/fanc#186 · Filter by author NMaziak opened on Apr 1, 2024
  2