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Filter PacBio tumour-only SAVANA SVs against the SV PoN; cap ReConPlot SVs (#225) - #228

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fix/savana-pb-tumoronly-pon
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Filter PacBio tumour-only SAVANA SVs against the SV PoN; cap ReConPlot SVs (#225)#228
ljwharbers wants to merge 2 commits into
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fix/savana-pb-tumoronly-pon

Lower --reconplot_max_svs to 1000; document what the PoN filter leaves

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