sperm

This repository collects pipelines, codes, and some intermediate results for the study of mosaic SNV/Indels for sperm, blood, and other samples of a control cohort.

A toolbox to analyze spherical and filamentous objects in multifocal images with high precision.

[TASE 2024] SFCNet: Automated Non-Invasive Analysis of Motile Sperms Using Sperm Feature-Correlated Network

This repository collects pipelines, codes, and some intermediate results for the study of mosaic SNV/Indels for sperm, blood, saliva samples of a transmission genomic study.

Automated sperm motility analysis pipeline with OpenCV-based detection and standard motility parameter calculations (VCL, VSL, VAP). Features motion-aware cascade matching and batch processing

Website listing services that allow you to contribute to scientific research with your data, genome, body, and more.

Demonstrating data manipulation and statistical analysis abilities through curated datasets and code.

Analysis scripts for "A method for low-coverage single-gamete sequence analysis demonstrates adherence to Mendel's first law across a large sample of human sperm" https://elifesciences.org/articles/76383

Sperm detection and tracking methods from this paper: https://arxiv.org/abs/2002.04034

Providing an interactive platform for exploring >13,800 sperm proteins across 9 vertebrate species, including a core set of 135 order-level conserved proteins underpins essential sperm functions. This application enabling users to filter, visualize, and analyze proteins across these complex datasets.

This folder contains computational analysis about the movement of mouse sperms.

Optical microscope sperm image

Supporting material for project on differences in sperm morphology and velocity of ruffs.