telomeres

Identify and find telomeres, or telomeric repeats in a genome.

A tool for the recovery of unassembled telomeres from soft-clipped read alignments.

A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files

A method for measuring allele-specific telomere length and characterizing telomere variant repeat sequences from long reads.

Topsicle utilizes abundance of telomere pattern k-mers to estimate telomere length in long read.

A comprehensive telomere annotation tool for genome assemblies and graphs.

A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, and for haplotype inference.

A simple regular expression based method for measuring telomere length from long-read sequencing

TeloXplorer: chromosome-end-resolved telomere analysis for long-read sequencing data

Compute telomeric read fractions in a BAM file.

Impacts of Space Flight on Telomeres & DNA Rearrangements in Astronauts

Differential Gene Analysis of Telomere Microarray Data

Discovering telomerase inhibitors with machine learning.

qFISH telomere length

Data for: Seeker et al. 2016, PLOS ONE, "Method specific calibration corrects for DNA extraction method effects on relative telomere length measurements by quantitative PCR"

Evaluating impacts of chronic, low dose ionizing radiation on various biomarkers in Fukushima boar and snake

Pipeline for telomere-to-telomere QC of genome assemblies: assembly stats, telomere detection, gap analysis, clustering, and visualization.

This project simulates telomere dynamics during cell division and compares normal somatic cells with cancer cells exhibiting telomerase activity. The model demonstrates key biological principles behind cellular aging and replicative immortality.

TeloMosa: A bioinformatics tool for measuring telomeric repeat length and identifying TelC–TelG mosaic repeats (mTRs) from Oxford Nanopore long-read sequencing data.